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    ripk4 receptor interacting serine/threonine kinase 4 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 733737, updated on 4-Nov-2024

    Summary

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    Official Symbol
    ripk4provided by Xenbase
    Official Full Name
    receptor interacting serine/threonine kinase 4provided by Xenbase
    Primary source
    Xenbase:XB-GENE-494474
    See related
    Ensembl:ENSXETG00000000067 AllianceGenome:Xenbase:XB-GENE-494474
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    dik; pkk; rip4; ankk2; ankrd3; ripk4-a; ripk4-b
    Summary
    Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human RIPK4 (receptor interacting serine/threonine kinase 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See ripk4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (9712857..9730040)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (5717062..5732437)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene C2 calcium-dependent domain containing 2 Neighboring gene uncharacterized LOC116408746 Neighboring gene PR domain 15 Neighboring gene transmembrane serine protease 2 gene 1 Neighboring gene transmembrane serine protease 2 gene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    receptor-interacting serine/threonine-protein kinase 4
    Names
    Receptor-interacting protein kinase 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      9712857..9730040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002941286.5 → XP_002941332.1  receptor-interacting serine/threonine-protein kinase 4

      UniProtKB/TrEMBL
      A0A803KBY1, F7C1Y6
      Related
      ENSXETP00000111772.1, ENSXETT00000116646.1
      Conserved Domains (3) summary
      PHA03095
      Location:440 → 703
      PHA03095; ankyrin-like protein; Provisional
      cd14025
      Location:25 → 291
      STKc_RIP4_like; Catalytic domain of the Serine/Threonine kinases, Receptor Interacting Protein 4 and similar proteins
      sd00045
      Location:538 → 568
      ANK; ANK repeat [structural motif]

    RNA

    1. XR_004221199.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials