nenf neudesin neurotrophic factor [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: nenfprovided by Xenbase
Official Full Name: neudesin neurotrophic factorprovided by Xenbase
Primary source: Xenbase:XB-GENE-972221
See related: Ensembl:ENSXETG00000014379 AllianceGenome:Xenbase:XB-GENE-972221
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: cir2; spuf; scirp10
Summary: Orthologous to human NENF (neudesin neurotrophic factor). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	5	NC_030681.2 (14587949..14592424, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	5	NC_030681.1 (10801254..10805733, complement)

Chromosome 5 - NC_030681.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
is_active_in endomembrane system	IBA Inferred from Biological aspect of Ancestor more info
is_active_in endoplasmic reticulum	IBA Inferred from Biological aspect of Ancestor more info
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: neudesin

Names: neuron derived neurotrophic factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001030454.1 → NP_001025625.1 neudesin precursor

See identical proteins and their annotated locations for NP_001025625.1

Status: PROVISIONAL

Source sequence(s)

BC091102

UniProtKB/TrEMBL

F6THK0, Q5BKE7

Related

ENSXETP00000031442.4, ENSXETT00000031442.5

Conserved Domains (1) summary

pfam00173
Location:40 → 101

Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

14587949..14592424 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012963076.2 → XP_012818530.1 neudesin isoform X1

UniProtKB/TrEMBL

A0A8J0SP15

Conserved Domains (1) summary

pfam00173
Location:47 → 90

Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain