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    snoRNA:Or-CD4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740586, updated on 11-Sep-2024

    Summary

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    Official Symbol
    snoRNA:Or-CD4provided by FlyBase
    Primary source
    FLYBASE:FBgn0082919
    Locus tag
    Dmel_CR34542
    See related
    AllianceGenome:FB:FBgn0082919
    Gene type
    ncRNA
    RNA name
    snoRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR34542; Dmel\CR34542; DmOr_cd4; DmOr_cd4 snoRNA; orphan CD4; snoRNA:Or-cd4
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    Genomic context

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    See snoRNA:Or-CD4 in Genome Data Viewer
    Location:
    51B6-51B6; 2-72 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14624253..14624330)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10511758..10511835)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U snoRNA host gene 5 Neighboring gene beta Hydroxy acid dehydrogenase 2 Neighboring gene Mtk-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Low FoxO expression in Drosophila somatosensory neurons protects dendrite growth under nutrient restriction. Poe AR, et al. Elife, 2020 May 19. PMID 32427101, Free PMC Article
    2. Identification of miR-305, a microRNA that promotes aging, and its target mRNAs in Drosophila. Ueda M, et al. Genes Cells, 2018 Feb. PMID 29314553
    3. Comprehensive map of ribosomal 2'-O-methylation and C/D box snoRNAs in Drosophila melanogaster. Sklias A, et al. Nucleic Acids Res, 2024 Apr 12. PMID 38416577, Free PMC Article
    4. Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs. Huang ZP, et al. RNA, 2005 Aug. PMID 15987805, Free PMC Article
    5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • alternate names: snoRNA:Or-cd4
    • snoRNA:Or-CD4-RA; Dmel\snoRNA:Or-CD4-RA; CR34542-RA; Dmel\CR34542-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14624253..14624330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_003804.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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