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    si:dkey-97a13.12 si:dkey-97a13.12 [ Danio rerio (zebrafish) ]

    Gene ID: 570567, updated on 12-Sep-2024

    Summary

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    Official Symbol
    si:dkey-97a13.12provided by ZNC
    Official Full Name
    si:dkey-97a13.12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-614
    See related
    Ensembl:ENSDARG00000095649 AllianceGenome:ZFIN:ZDB-GENE-070912-614
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See si:dkey-97a13.12 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (42088312..42092043, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (42238892..42242820, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene centrosome and spindle pole associated protein 1b Neighboring gene valosin containing protein (p97)/p47 complex interacting protein 1 Neighboring gene alcohol dehydrogenase iron containing 1 Neighboring gene corticoliberin-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein si:dkey-97a13.12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      42088312..42092043 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001923700.7 → XP_001923735.1  uncharacterized protein si:dkey-97a13.12

      UniProtKB/TrEMBL
      A0A8M1QRB7
      Related
      ENSDARP00000117720.1, ENSDART00000142663.2
      Conserved Domains (1) summary
      cd00174
      Location:42 → 86
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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