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    rgs3b regulator of G protein signaling 3b [ Danio rerio (zebrafish) ]

    Gene ID: 557360, updated on 28-Oct-2024

    Summary

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    Official Symbol
    rgs3bprovided by ZNC
    Official Full Name
    regulator of G protein signaling 3bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060531-24
    See related
    Ensembl:ENSDARG00000035132 AllianceGenome:ZFIN:ZDB-GENE-060531-24
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7137300; si:ch211-196f15.2
    Summary
    Predicted to be active in nucleus and plasma membrane. Is expressed in cephalic musculature; myotome; and somite. Orthologous to human RGS3 (regulator of G protein signaling 3). [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    all
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    Genomic context

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    See rgs3b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (63749333..63864001)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (63067527..63183155)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene cdkn1a interacting zinc finger protein 1b Neighboring gene dynamin 1b Neighboring gene pregnancy-associated plasma protein A, pappalysin 1b Neighboring gene cardiac myosin light chain-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Regulator of g protein signaling 3 modulates wnt5b calcium dynamics and somite patterning. Freisinger CM, et al. PLoS Genet, 2010 Jul 8. PMID 20628572, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    regulator of G-protein signaling 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      63749333..63864001
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221553.1 → XP_068077654.1  regulator of G-protein signaling 3 isoform X1

    2. XM_068221554.1 → XP_068077655.1  regulator of G-protein signaling 3 isoform X2

    3. XM_068221555.1 → XP_068077656.1  regulator of G-protein signaling 3 isoform X3

      Related
      ENSDARP00000050870.4, ENSDART00000050871.5

    4. XM_068221556.1 → XP_068077657.1  regulator of G-protein signaling 3 isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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