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    tmem41aa transmembrane protein 41aa [ Danio rerio (zebrafish) ]

    Gene ID: 553803, updated on 2-Nov-2024

    Summary

    Official Symbol
    tmem41aaprovided by ZNC
    Official Full Name
    transmembrane protein 41aaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-53
    See related
    Ensembl:ENSDARG00000070028 AllianceGenome:ZFIN:ZDB-GENE-050522-53
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    tmem41a; zgc:112259
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM41A (transmembrane protein 41A). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See tmem41aa in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (12444494..12455521)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (12473291..12484318)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene zgc:162707 Neighboring gene enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase Neighboring gene insulin-like growth factor 2 mRNA binding protein 2a Neighboring gene transformer 2 beta homolog

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC112259

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 41A-A
    Names
    transmembrane protein 41a
    NP_001018601.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020765.1NP_001018601.1  transmembrane protein 41A-A precursor

      See identical proteins and their annotated locations for NP_001018601.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095709
      UniProtKB/Swiss-Prot
      A9C3W2, Q502G2
      Related
      ENSDARP00000093207.3, ENSDART00000102430.5
      Conserved Domains (1) summary
      pfam09335
      Location:102223
      SNARE_assoc; SNARE associated Golgi protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      12444494..12455521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)