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    poldip2 polymerase (DNA-directed), delta interacting protein 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549852, updated on 17-Aug-2024

    Summary

    Official Symbol
    poldip2provided by Xenbase
    Official Full Name
    polymerase (DNA-directed), delta interacting protein 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-973391
    See related
    Ensembl:ENSXETG00000023792
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
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    Genomic context

    See poldip2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (34979455..34989086)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (27377118..27386709)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene sebox homeobox Neighboring gene transmembrane protein 199 Neighboring gene TSR1, ribosome maturation factor Neighboring gene serine racemase Neighboring gene SMG6 nonsense mediated mRNA decay factor

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    polymerase delta-interacting protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017098.1NP_001017098.1  polymerase delta-interacting protein 2

      Status: PROVISIONAL

      Source sequence(s)
      CR761305
      UniProtKB/TrEMBL
      A0A7D9NKD0, Q0VFQ5
      Related
      ENSXETP00000051302.3, ENSXETT00000051302.4
      Conserved Domains (2) summary
      cl01119
      Location:234355
      DUF525; ApaG domain
      cl01548
      Location:74200
      YccV-like; Hemimethylated DNA-binding protein YccV like

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      34979455..34989086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012957030.3XP_012812484.1  polymerase delta-interacting protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8J0SFQ2, Q0VFQ5
      Conserved Domains (2) summary
      pfam04379
      Location:251336
      DUF525; Protein of unknown function (DUF525)
      cl01548
      Location:72198
      YccV-like; Hemimethylated DNA-binding protein YccV like