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    nop10 NOP10 ribonucleoprotein [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 548917, updated on 17-Aug-2024

    Summary

    Official Symbol
    nop10provided by Xenbase
    Official Full Name
    NOP10 ribonucleoproteinprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1001719
    See related
    Ensembl:ENSXETG00000024771
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    nola3
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (142943461..142947025)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (130515637..130519202)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene amphinase-4-like Neighboring gene lysophosphatidylcholine acyltransferase 4 Neighboring gene solute carrier family 12 member 6 Neighboring gene ER membrane protein complex subunit 4

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    H/ACA ribonucleoprotein complex subunit 3
    Names
    NOP10 ribonucleoprotein homolog
    nucleolar protein family A, member 3 (H/ACA small nucleolar RNPs)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016163.2NP_001016163.1  H/ACA ribonucleoprotein complex subunit 3

      See identical proteins and their annotated locations for NP_001016163.1

      Status: PROVISIONAL

      Source sequence(s)
      CR761916
      UniProtKB/TrEMBL
      A4IHX9, F7BMB5
      Related
      ENSXETP00000053313.2, ENSXETT00000053313.4
      Conserved Domains (1) summary
      pfam04135
      Location:651
      Nop10p; Nucleolar RNA-binding protein, Nop10p family

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      142943461..142947025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)