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    cyb5d2 cytochrome b5 domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 548908, updated on 4-Nov-2024

    Summary

    Official Symbol
    cyb5d2provided by Xenbase
    Official Full Name
    cytochrome b5 domain containing 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-981419
    See related
    Ensembl:ENSXETG00000018225 AllianceGenome:Xenbase:XB-GENE-981419
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to act upstream of or within nervous system development. Predicted to be located in extracellular region. Predicted to be active in endomembrane system and membrane. Orthologous to human CYB5D2 (cytochrome b5 domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See cyb5d2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (101323316..101329319, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (97511334..97517337, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 G1 Neighboring gene ankyrin repeat and FYVE domain containing 1 Neighboring gene zinc finger, ZZ-type with EF-hand domain 1 Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within nervous system development IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    neuferricin
    Names
    cytochrome b5 domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016154.1NP_001016154.1  neuferricin precursor

      See identical proteins and their annotated locations for NP_001016154.1

      Status: PROVISIONAL

      Source sequence(s)
      CR761951
      UniProtKB/Swiss-Prot
      Q28FI8
      UniProtKB/TrEMBL
      B7ZSR5
      Related
      ENSXETP00000039513.2, ENSXETT00000039513.4
      Conserved Domains (1) summary
      pfam00173
      Location:48109
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      101323316..101329319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)