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    AT2G45695 Ubiquitin related modifier 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 5007965, updated on 18-Aug-2023

    Summary

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    Gene symbol
    AT2G45695
    Gene description
    Ubiquitin related modifier 1
    Primary source
    Araport:AT2G45695
    Locus tag
    AT2G45695
    See related
    TAIR:AT2G45695
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ubiquitin-related modifier 11; URM11
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    Genomic context

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    See AT2G45695 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (18825954..18826899)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene TCP family transcription factor Neighboring gene shrunken seed protein (SSE1) Neighboring gene sterile alpha motif (SAM) domain-containing protein Neighboring gene Zinc-binding ribosomal protein family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001084595.3

    General protein information

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    Preferred Names
    Ubiquitin related modifier 1
    NP_001078064.1
    • Ubiquitin related modifier 1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin related modifier 1 (InterPro:IPR015221), Ubiquitin-related modifier 1 (InterPro:IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); BEST Arabidopsis thaliana protein match is: Ubiquitin related modifier 1 (TAIR:AT3G61113.1); Has 341 Blast hits to 341 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 124; Plants - 33; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18825954..18826899
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084595.3 → NP_001078064.1  Ubiquitin related modifier 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078064.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MDQ1, Q570Q1
      UniProtKB/TrEMBL
      A0A178VS32, A0A5S9X7C9, A0A654F3I2
      Conserved Domains (1) summary
      pfam09138
      Location:2 → 101
      Urm1; Urm1 (Ubiquitin related modifier)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0MDQ1.2

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