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    fbxl15 F-box and leucine-rich repeat protein 15 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496536, updated on 17-Aug-2024

    Summary

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    Official Symbol
    fbxl15provided by Xenbase
    Official Full Name
    F-box and leucine-rich repeat protein 15provided by Xenbase
    Primary source
    Xenbase:XB-GENE-973058
    See related
    Ensembl:ENSXETG00000014210
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    fbl15; fbxo37
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (43322012..43330889, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (33950985..33959855, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene paired box 2 Neighboring gene CUE domain containing 2 Neighboring gene pleckstrin and Sec7 domain containing Neighboring gene cilia- and flagella-associated protein 251 Neighboring gene cilia- and flagella-associated protein 251-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within G2/M transition of mitotic cell cycle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within SCF-dependent proteasomal ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within bone mineralization ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within dorsal/ventral pattern formation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within positive regulation of BMP signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    acts_upstream_of_or_within protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of SCF ubiquitin ligase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    F-box/LRR-repeat protein 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001011123.2 → NP_001011123.1  F-box/LRR-repeat protein 15

      See identical proteins and their annotated locations for NP_001011123.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084522
      UniProtKB/Swiss-Prot
      Q5XGC0
      UniProtKB/TrEMBL
      A0A6I8S0X3
      Related
      ENSXETP00000111499.1, ENSXETT00000123091.1
      Conserved Domains (2) summary
      cd09293
      Location:65 → 251
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:47 → 81
      LRR_AMN1; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      43322012..43330889 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012966505.3 → XP_012821959.2  F-box/LRR-repeat protein 15 isoform X1

      UniProtKB/TrEMBL
      A0A6I8S0X3, A0A803JU14
      Conserved Domains (2) summary
      cd09293
      Location:65 → 251
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:47 → 81
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. XM_031905026.1 → XP_031760886.1  F-box/LRR-repeat protein 15 isoform X1

      UniProtKB/TrEMBL
      A0A6I8S0X3, A0A803JU14
      Related
      ENSXETP00000031072.4, ENSXETT00000031072.4
      Conserved Domains (2) summary
      cd09293
      Location:65 → 251
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:47 → 81
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5XGC0.1 GenPept UniProtKB/Swiss-Prot:Q5XGC0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.