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    Hlc putative ATP-dependent RNA helicase DDX56 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 4577824, updated on 22-Jun-2024

    Summary

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    Gene symbol
    Hlc
    Gene description
    putative ATP-dependent RNA helicase DDX56
    See related
    VectorBase:AGAMI1_010916
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Orthologs
    fruit fly all
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    Genomic context

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    See Hlc in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (75628326..75630684)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene homeobox protein unc-4 Neighboring gene uncharacterized LOC133393262 Neighboring gene uncharacterized LOC1270783 Neighboring gene mitochondrial ribosomal protein L14 Neighboring gene DEAH-box helicase 15 Neighboring gene grpE protein homolog, mitochondrial Roe1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX56
    Names
    AGAP011147-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      75628326..75630684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_564375.4 → XP_564375.3  probable ATP-dependent RNA helicase DDX56

    Nucleotide Protein Strain
    Heading Accession and Version

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