isoc2 isochorismatase domain containing 2 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: isoc2provided by Xenbase
Official Full Name: isochorismatase domain containing 2provided by Xenbase
Primary source: Xenbase:XB-GENE-946952
See related: Ensembl:ENSXETG00000000143
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	7	NC_030683.2 (105993187..106015880)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	7	NC_030683.1 (98014993..98036599)

Chromosome 7 - NC_030683.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: isochorismatase domain-containing protein 2

Names: isochorismatase domain-containing protein 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005029.1 → NP_001005029.1 isochorismatase domain-containing protein 2 precursor

See identical proteins and their annotated locations for NP_001005029.1

Status: PROVISIONAL

Source sequence(s)

BC076875

UniProtKB/Swiss-Prot

Q6DF67

UniProtKB/TrEMBL

A0A6I8QWX2

Conserved Domains (1) summary

cd01012
Location:17 → 170

YcaC_related; YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

105993187..106015880

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_012966424.3 → XP_012821878.1 isochorismatase domain-containing protein 2 isoform X1

See identical proteins and their annotated locations for XP_012821878.1

UniProtKB/Swiss-Prot

Q6DF67

UniProtKB/TrEMBL

A0A6I8QWX2

Related

ENSXETP00000076744.2, ENSXETT00000074188.2

Conserved Domains (1) summary

cd01012
Location:17 → 170

YcaC_related; YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. ...