U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    actr8 ARP8 actin related protein 8 homolog [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448046, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    actr8provided by Xenbase
    Official Full Name
    ARP8 actin related protein 8 homologprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-6454262
    See related
    Ensembl:ENSXETG00000038995
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    arp8; ino80n
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See actr8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (150458694..150473573)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016688840.1 (209..3010, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene parapinopsin Neighboring gene selenoprotein K Neighboring gene choline dehydrogenase Neighboring gene calcium channel, voltage-dependent, L type, alpha 1D subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC69371

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    actin-related protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005453.1 → NP_001005453.1  actin-related protein 8

      See identical proteins and their annotated locations for NP_001005453.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074567
      UniProtKB/TrEMBL
      A0A6I8QMP6, Q6GLD2
      Related
      ENSXETP00000069784.2, ENSXETT00000100205.2
      Conserved Domains (1) summary
      cl17037
      Location:163 → 653
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      150458694..150473573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031899982.1 → XP_031755842.1  actin-related protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A6I8QMP6, A0A8J1JD76
      Conserved Domains (1) summary
      cl17037
      Location:172 → 649
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    2. XM_031899984.1 → XP_031755844.1  actin-related protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A8J1JD85, Q28CC7
      Conserved Domains (1) summary
      cl17037
      Location:167 → 621
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    3. XM_031899983.1 → XP_031755843.1  actin-related protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A6I8QMP6, A0A8J1JD76
      Conserved Domains (1) summary
      cl17037
      Location:172 → 649
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.