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    dnal4a dynein, axonemal, light chain 4a [ Danio rerio (zebrafish) ]

    Gene ID: 445209, updated on 2-Nov-2024

    Summary

    Official Symbol
    dnal4aprovided by ZNC
    Official Full Name
    dynein, axonemal, light chain 4aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040801-122
    See related
    Ensembl:ENSDARG00000031116 AllianceGenome:ZFIN:ZDB-GENE-040801-122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:100999
    Summary
    Predicted to act upstream of or within microtubule-based process. Predicted to be located in cytoplasm and microtubule. Predicted to be part of dynein complex. Human ortholog(s) of this gene implicated in congenital mirror movement disorder. Orthologous to human DNAL4 (dynein axonemal light chain 4). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See dnal4a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (24511959..24518496)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (24381389..24387948)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490582 Neighboring gene neuronal pentraxin receptor a Neighboring gene SP110 nuclear antigen, tandem duplicate 1 Neighboring gene chromodomain-helicase-DNA-binding protein 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    part_of dynein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dynein, axonemal, light chain 4a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003603.1NP_001003603.1  dynein, axonemal, light chain 4a

      See identical proteins and their annotated locations for NP_001003603.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077142
      UniProtKB/TrEMBL
      A0A8M1N1M5, Q6DEH4
      Related
      ENSDARP00000115737.1, ENSDART00000133898.2
      Conserved Domains (1) summary
      pfam01221
      Location:21104
      Dynein_light; Dynein light chain type 1

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      24511959..24518496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395226.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      335751..342288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)