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    CG6569 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42573, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG6569provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038909
    Locus tag
    Dmel_CG6569
    See related
    AllianceGenome:FB:FBgn0038909
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6569
    Summary
    Predicted to be involved in Golgi organization. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. Is expressed in embryonic head sensory system; sense organ; and sensory nervous system primordium. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG6569 in Genome Data Viewer
    Location:
    93F14-93F14; 3-73 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21866172..21867919, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17691894..17693641, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45644 Neighboring gene long non-coding RNA:CR45645 Neighboring gene larsen Neighboring gene uncharacterized protein Neighboring gene Chibby Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
    2. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    3. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in Golgi cis cisterna IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in Golgi cisterna membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cis-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6569-PA
    CG6569-PB
    CG6569-PC
    CG6569-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21866172..21867919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142731.3 → NP_650988.1  uncharacterized protein Dmel_CG6569, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VD71
      Related
      FBpp0083553
      Conserved Domains (1) summary
      cd11650
      Location:293 → 377
      AT4G37440_like; Uncharacterized protein domain conserved in plants

    2. NM_169975.3 → NP_732669.1  uncharacterized protein Dmel_CG6569, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732669.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IN21
      Related
      FBpp0083554
      Conserved Domains (1) summary
      cd11650
      Location:276 → 360
      AT4G37440_like; Uncharacterized protein domain conserved in plants

    3. NM_001104394.2 → NP_001097864.1  uncharacterized protein Dmel_CG6569, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JR73
      Conserved Domains (1) summary
      pfam04111
      Location:20 → 108
      APG6; Autophagy protein Apg6

    4. NM_001275883.1 → NP_001262812.1  uncharacterized protein Dmel_CG6569, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262812.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KHU8
      Conserved Domains (1) summary
      pfam04111
      Location:20 → 108
      APG6; Autophagy protein Apg6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KHU8 A0A0B4KHU8
    A8JR73 A8JR73
    Q8IN21 Q8IN21
    Q9VD71 Q9VD71

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