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    Obp84a Odorant-binding protein 84a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40874, updated on 27-Aug-2024

    Summary

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    Official Symbol
    Obp84aprovided by FlyBase
    Official Full Name
    Odorant-binding protein 84aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0011282
    Locus tag
    Dmel_CG1176
    See related
    AllianceGenome:FB:FBgn0011282
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    84a; CG1176; DmelObp84a; Dmel\CG1176; OBP84a; PBP4; pbprp-4; PBPRP-4; pbprp4; Pbprp4; PBPRP4
    Summary
    Predicted to enable pheromone binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in extracellular region. Is expressed in antenna and antennal sense organ. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    84D3-84D3; 3-48 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (7250725..7251957, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (3076447..3077679, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DTW domain containing 2 Neighboring gene Glucose dehydrogenase Neighboring gene long non-coding RNA:CR44338 Neighboring gene Synaptotagmin 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Members of a family of Drosophila putative odorant-binding proteins are expressed in different subsets of olfactory hairs. Pikielny CW, et al. Neuron, 1994 Jan. PMID 7545907
    2. Expression patterns of two putative odorant-binding proteins in the olfactory organs of Drosophila melanogaster have different implications for their functions. Park SK, et al. Cell Tissue Res, 2000 Apr. PMID 10805087
    3. Stochastic Modeling of Gene Expression Evolution Uncovers Tissue- and Sex-Specific Properties of Expression Evolution in the Drosophila Genus. Pal S, et al. J Comput Biol, 2023 Jan. PMID 36037023, Free PMC Article
    4. The genetics of olfaction. Griff IC, et al. Curr Opin Genet Dev, 1995 Oct. PMID 8664555
    5. Organization and function of Drosophila odorant binding proteins. Larter NK, et al. Elife, 2016 Nov 15. PMID 27845621, Free PMC Article

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 84a
    Names
    CG1176-PA
    CG1176-PC
    Obp84a-PA
    Obp84a-PC
    Pbprp4
    Pheromone-binding protein-related protein 4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      7250725..7251957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104230.3 → NP_001097700.2  Odorant-binding protein 84a, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097700.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54194
      Conserved Domains (1) summary
      smart00708
      Location:116 → 209
      PhBP; Insect pheromone/odorant binding protein domains

    2. NM_057642.3 → NP_476990.1  Odorant-binding protein 84a, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476990.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8JQU8, B3DN19, P54194, Q9VI86
      Related
      FBpp0081115
      Conserved Domains (1) summary
      smart00708
      Location:70 → 163
      PhBP; Insect pheromone/odorant binding protein domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P54194.1 P54194

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