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    pgrmc2 progesterone receptor membrane component 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 394928, updated on 4-Nov-2024

    Summary

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    Official Symbol
    pgrmc2provided by Xenbase
    Official Full Name
    progesterone receptor membrane component 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-981038
    See related
    AllianceGenome:Xenbase:XB-GENE-981038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    dg6; pmbp
    Summary
    Predicted to be located in membrane. Orthologous to human PGRMC2 (progesterone receptor membrane component 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See pgrmc2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (64199792..64220455)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (54744051..54752855)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene sodium channel and clathrin linker 1 Neighboring gene jade family PHD finger 1 Neighboring gene La ribonucleoprotein domain family member 1B Neighboring gene abhydrolase domain containing 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    membrane-associated progesterone receptor component 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      64199792..64220455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002932055.5 → XP_002932101.3  membrane-associated progesterone receptor component 2

      UniProtKB/TrEMBL
      A0A8J0QLI7, Q6DEP2
      Conserved Domains (1) summary
      pfam00173
      Location:177 → 240
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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