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    kctd15 potassium channel tetramerization domain containing 15 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 394848, updated on 18-Sep-2024

    Summary

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    Official Symbol
    kctd15provided by Xenbase
    Official Full Name
    potassium channel tetramerization domain containing 15provided by Xenbase
    Primary source
    Xenbase:XB-GENE-944069
    See related
    Ensembl:ENSXETG00000016868
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    kctd1
    Orthologs
    human mouse all
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    Genomic context

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    See kctd15 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (67882944..67915728, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (19729531..19762000, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene synovial sarcoma translocation gene on chromosome 18-like 2 Neighboring gene LSM14A mRNA processing body assembly factor Neighboring gene carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 Neighboring gene uncharacterized LOC116410406

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC76138

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables transcription corepressor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein kctd15
    Names
    potassium channel tetramerisation domain containing 1
    potassium channel tetramerisation domain containing 15
    potassium channel tetramerization domain-containing protein 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203908.1 → NP_989239.1  BTB/POZ domain-containing protein kctd15

      Status: PROVISIONAL

      Source sequence(s)
      BC063913
      UniProtKB/Swiss-Prot
      Q6P3P4
      UniProtKB/TrEMBL
      A0A803J4N2
      Related
      ENSXETP00000036752.3, ENSXETT00000036752.5
      Conserved Domains (1) summary
      cd18388
      Location:29 → 127
      BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      67882944..67915728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018092973.2 → XP_017948462.1  BTB/POZ domain-containing protein kctd15 isoform X1

      UniProtKB/Swiss-Prot
      Q6P3P4
      UniProtKB/TrEMBL
      A0A803J4N2
      Conserved Domains (1) summary
      cd18388
      Location:29 → 127
      BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)

    2. XM_012960765.3 → XP_012816219.1  BTB/POZ domain-containing protein kctd15 isoform X1

      UniProtKB/Swiss-Prot
      Q6P3P4
      UniProtKB/TrEMBL
      A0A803J4N2
      Conserved Domains (1) summary
      cd18388
      Location:29 → 127
      BTB_POZ_KCTD15; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 15 (KCTD15)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6P3P4.1 GenPept UniProtKB/Swiss-Prot:Q6P3P4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.