qtrt1 queuine tRNA-ribosyltransferase 1 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: qtrt1provided by Xenbase
Official Full Name: queuine tRNA-ribosyltransferase 1provided by Xenbase
Primary source: Xenbase:XB-GENE-6076185
See related: Ensembl:ENSXETG00000037764 AllianceGenome:Xenbase:XB-GENE-6076185
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary: Predicted to enable protein heterodimerization activity; protein homodimerization activity; and tRNA-guanosine(34) queuine transglycosylase activity. Predicted to be involved in tRNA-guanine transglycosylation. Predicted to act upstream of or within tRNA processing. Predicted to be located in mitochondrial outer membrane. Orthologous to human QTRT1 (queuine tRNA-ribosyltransferase catalytic subunit 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (138667722..138680495, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	3	NC_030679.1 (127858156..127887255, complement)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables glycosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables protein heterodimerization activity	ISS Inferred from Sequence or Structural Similarity more info
enables protein homodimerization activity	ISS Inferred from Sequence or Structural Similarity more info
enables tRNA-guanosine(34) queuine transglycosylase activity	IBA Inferred from Biological aspect of Ancestor more info
enables tRNA-guanosine(34) queuine transglycosylase activity	IEA Inferred from Electronic Annotation more info
enables tRNA-guanosine(34) queuine transglycosylase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within tRNA processing	IEA Inferred from Electronic Annotation more info
involved_in tRNA-guanine transglycosylation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within tRNA-guanine transglycosylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: queuine tRNA-ribosyltransferase catalytic subunit 1

Names: TGas042b06.1; guanine insertion enzyme; tRNA-guanine transglycosylase

NP_989090.1

EC 2.4.2.64

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.