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    CG17658 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37793, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CG17658provided by FlyBase
    Primary source
    FLYBASE:FBgn0034924
    Locus tag
    Dmel_CG17658
    See related
    AllianceGenome:FB:FBgn0034924
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17658
    Summary
    Is expressed in germline cell; organism; pole plasm; and primordial germ cell. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG17658 in Genome Data Viewer
    Location:
    60A9-60A9; 2-105 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23895063..23896997)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19782586..19784520)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Decapping protein 1 Neighboring gene DNA ligase 1 Neighboring gene Upf3 Neighboring gene uncharacterized protein Neighboring gene Lost PHDs of trr Neighboring gene uncharacterized protein Neighboring gene Nucleosome assembly protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila Upf1 and Upf2 loss of function inhibits cell growth and causes animal death in a Upf3-independent manner. Avery P, et al. RNA, 2011 Apr. PMID 21317294, Free PMC Article
    2. Functional analysis of the Drosophila embryonic germ cell transcriptome by RNA interference. Jankovics F, et al. PLoS One, 2014. PMID 24896584, Free PMC Article
    3. Hidden genetic variation shapes the structure of functional elements in Drosophila. Chakraborty M, et al. Nat Genet, 2018 Jan. PMID 29255259, Free PMC Article
    4. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17658-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23895063..23896997
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138001.4 → NP_611845.2  uncharacterized protein Dmel_CG17658 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611845.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYY5, Q9W1H2
      Related
      FBpp0072042
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SYY5 Q8SYY5
    Q9W1H2 Q9W1H2

    Gene LinkOut

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