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    Obp58d Odorant-binding protein 58d [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37609, updated on 28-Oct-2024

    Summary

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    Official Symbol
    Obp58dprovided by FlyBase
    Official Full Name
    Odorant-binding protein 58dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034770
    Locus tag
    Dmel_CG13519
    See related
    AllianceGenome:FB:FBgn0034770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13519; DmelObp58d; Dmel\CG13519
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    all
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    Genomic context

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    See Obp58d in Genome Data Viewer
    Location:
    59A3-59A3; 2-101 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22706934..22707772)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18594439..18595277)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 58b Neighboring gene Odorant-binding protein 58c Neighboring gene antisense RNA:CR43735 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Uncovering the functional constraints underlying the genomic organization of the odorant-binding protein genes. Librado P, et al. Genome Biol Evol, 2013. PMID 24148943, Free PMC Article
    2. Genome-wide analysis of the odorant-binding protein gene family in Drosophila melanogaster. Hekmat-Scafe DS, et al. Genome Res, 2002 Sep. PMID 12213773, Free PMC Article
    3. Molecular and cellular organization of odorant binding protein genes in Drosophila. Park K, et al. Heliyon, 2024 May 15. PMID 38694054, Free PMC Article
    4. Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution. Vieira FG, et al. Genome Biol, 2007. PMID 18039354, Free PMC Article
    5. Molecular evolution of the major chemosensory gene families in insects. Sánchez-Gracia A, et al. Heredity (Edinb), 2009 Sep. PMID 19436326

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 58d
    Names
    CG13519-PA
    Obp58d-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22706934..22707772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137867.2 → NP_611711.1  Odorant-binding protein 58d [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611711.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D4G7D7, Q9W207
      Related
      FBpp0071783
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W207 Q9W207

    Gene LinkOut

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