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    CG12391 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36170, updated on 2-Nov-2024

    Summary

    Official Symbol
    CG12391provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033581
    Locus tag
    Dmel_CG12391
    See related
    AllianceGenome:FB:FBgn0033581
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.201; Dmel\CG12391
    Summary
    Enables DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including antennal primordium; embryonic/larval midgut primordium; ganglia; head epidermis primordium; and mesoderm. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See CG12391 in Genome Data Viewer
    Location:
    47D5-47D5; 2-63 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11147602..11150068, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7035107..7037573, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene schnurri

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription cis-regulatory region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG12391-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      11147602..11150068 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136795.4NP_610639.1  uncharacterized protein Dmel_CG12391 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610639.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K4G8
      Related
      FBpp0087300
      Conserved Domains (3) summary
      sd00017
      Location:418438
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:416438
      zf-C2H2; Zinc finger, C2H2 type
      pfam07776
      Location:240313
      zf-AD; Zinc-finger associated domain (zf-AD)