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    phr photorepair [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35735, updated on 2-Nov-2024

    Summary

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    Official Symbol
    phrprovided by FlyBase
    Official Full Name
    photorepairprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003082
    Locus tag
    Dmel_CG11205
    See related
    AllianceGenome:FB:FBgn0003082
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-OV1; anonOV1; C2PHR; CG11205; CG11205-PA; Dm CPD; Dmel\CG11205; Phl; PHR
    Summary
    Predicted to enable deoxyribodipyrimidine photo-lyase activity. Predicted to be involved in photoreactive repair. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See phr in Genome Data Viewer
    Location:
    43E18-43E18; 2-57 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (7825289..7827319)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (3712794..3714824)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene pummelig Neighboring gene cathepsin D Neighboring gene uncharacterized protein Neighboring gene Proteasome alpha1 subunit Neighboring gene uncharacterized protein Neighboring gene Proteasome alpha1 subunit-related Neighboring gene uncharacterized protein Neighboring gene Autophagy-related 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-level expression of the photorepair gene in Drosophila ovary and its evolutionary implications. Todo T, et al. Mutat Res, 1994 Nov. PMID 7526199
    2. Preferential inhibition of nucleosome assembly by ultraviolet-induced (6-4)photoproducts. Matsumoto H, et al. Photochem Photobiol, 1995 May. PMID 7770507
    3. Purification and characterization of Drosophila melanogaster photolyase. Kim ST, et al. Mutat Res, 1996 Jun 12. PMID 8676930
    4. No "End of History" for photolyases. Sancar A. Science, 1996 Apr 5. PMID 8600535
    5. Molecular evolution of the photolyase-blue-light photoreceptor family. Kanai S, et al. J Mol Evol, 1997 Nov. PMID 9342401

    See all (51) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables deoxyribodipyrimidine photo-lyase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables deoxyribodipyrimidine photo-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in photoreactive repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    photorepair
    Names
    CG11205-PA
    CG11205-PB
    CPD photolyase
    DNA photolyase
    anonymous ovarian cDNA 1
    photolyase
    phr-PA
    phr-PB
    NP_523653.2
    NP_724613.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      7825289..7827319
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078929.4 → NP_523653.2  photorepair, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523653.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q26373, Q7JY97
      Related
      FBpp0087914
      Conserved Domains (2) summary
      TIGR00591
      Location:93 → 547
      phr2; photolyase PhrII
      pfam00875
      Location:117 → 278
      DNA_photolyase; DNA photolyase

    2. NM_165564.1 → NP_724613.1  photorepair, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724613.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z757, Q26373
      Related
      FBpp0087915, FBtr0088839
      Conserved Domains (2) summary
      TIGR00591
      Location:73 → 527
      phr2; photolyase PhrII
      pfam00875
      Location:97 → 258
      DNA_photolyase; DNA photolyase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z757 A1Z757
    Q24443 Q24443
    Q26373 Q26373
    Q7JY97 Q7JY97

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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