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    bgnt-1.5 B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [ Caenorhabditis elegans ]

    Gene ID: 3565692, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bgnt-1.5
    Official Full Name
    B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog
    Primary source
    WormBase:WBGene00010694
    Locus tag
    CELE_K08H2.9
    See related
    AllianceGenome:WB:WBGene00010694
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transferase activity. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A13. Orthologous to human B4GAT1 (beta-1,4-glucuronyltransferase 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See bgnt-1.5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (13228502..13232359, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Skp1-related protein Neighboring gene SKP1 component POZ domain-containing protein Neighboring gene S ribonuclease Neighboring gene Immunity protein 72 of polymorphic toxin system Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog
    NP_001024774.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      13228502..13232359 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001029603.4 → NP_001024774.1  B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024774.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YWW9
      Conserved Domains (1) summary
      pfam13896
      Location:79 → 391
      Glyco_transf_49; Glycosyl-transferase for dystroglycan
    Nucleotide Protein
    Heading Accession and Version

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