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    CG11227 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33071, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CG11227provided by FlyBase
    Primary source
    FLYBASE:FBgn0031139
    Locus tag
    Dmel_CG11227
    See related
    AllianceGenome:FB:FBgn0031139
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11227
    Orthologs
    all
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    Genomic context

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    See CG11227 in Genome Data Viewer
    Location:
    19E5-19E5; 1-65 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20930972..20933559, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20801999..20804586, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene shaking B Neighboring gene pseudo Neighboring gene Inhibitor-3 Neighboring gene Niemann-Pick type C-1b Neighboring gene Serine protease 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lack of global meiotic sex chromosome inactivation, and paucity of tissue-specific gene expression on the Drosophila X chromosome. Mikhaylova LM, et al. BMC Biol, 2011 May 4. PMID 21542906, Free PMC Article
    2. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    3. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11227-PA
    CG11227-PB
    CG11227-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      20930972..20933559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167719.2 → NP_728372.1  uncharacterized protein Dmel_CG11227, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728372.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQ42
      Related
      FBpp0076967

    2. NM_134572.3 → NP_608416.1  uncharacterized protein Dmel_CG11227, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608416.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T3R3, Q9VRC8
      Related
      FBpp0076965
      Conserved Domains (1) summary
      pfam15866
      Location:540 → 743
      DUF4729; Domain of unknown function (DUF4729)

    3. NM_167718.2 → NP_728371.1  uncharacterized protein Dmel_CG11227, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728371.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQ43, Q8MZG5
      Related
      FBpp0076966
      Conserved Domains (1) summary
      pfam15866
      Location:551 → 754
      DUF4729; Domain of unknown function (DUF4729)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IQ42 Q8IQ42
    Q8IQ43 Q8IQ43
    Q8MZG5 Q8MZG5
    Q8T3R3 Q8T3R3
    Q9VRC8 Q9VRC8

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