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    CG8924 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32557, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG8924provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030710
    Locus tag
    Dmel_CG8924
    See related
    AllianceGenome:FB:FBgn0030710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CC9; Dmel\CG8924
    Summary
    Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG8924 in Genome Data Viewer
    Location:
    14A1-14A1; 1-52 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15941077..15944449)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15835110..15838482)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Ligand-gated chloride channel homolog 3 Neighboring gene Ranbp16 Neighboring gene Stromal interaction molecule Neighboring gene Ribosomal RNA processing 47 Neighboring gene mind-meld Neighboring gene mir-927 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The GAGA factor regulatory network: Identification of GAGA factor associated proteins. Lomaev D, et al. PLoS One, 2017. PMID 28296955, Free PMC Article
    2. Drosophila domino Exhibits Genetic Interactions with a Wide Spectrum of Chromatin Protein-Encoding Loci. Ellis K, et al. PLoS One, 2015. PMID 26555684, Free PMC Article
    3. GAGA factor: a multifunctional pioneering chromatin protein. Chetverina D, et al. Cell Mol Life Sci, 2021 May. PMID 33528710, Free PMC Article
    4. A network model of the molecular organization of chromatin in Drosophila. van Bemmel JG, et al. Mol Cell, 2013 Feb 21. PMID 23438860
    5. The Drosophila Pipsqueak protein defines a new family of helix-turn-helix DNA-binding proteins. Siegmund T, et al. Dev Genes Evol, 2002 Apr. PMID 11976954

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8924-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15941077..15944449
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132863.4 → NP_573091.1  uncharacterized protein Dmel_CG8924 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573091.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VXL5
      Related
      FBpp0073935
      Conserved Domains (3) summary
      smart00225
      Location:34 → 117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00376
      Location:378 → 407
      MerR; MerR family regulatory protein
      pfam00651
      Location:25 → 117
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VXL5 Q9VXL5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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