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    CG3071 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31213, updated on 2-Nov-2024

    Summary

    Official Symbol
    CG3071provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0023527
    Locus tag
    Dmel_CG3071
    See related
    AllianceGenome:FB:FBgn0023527
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    3071; Dmel\CG3071; EG:25E8.3
    Summary
    Predicted to enable snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and positive regulation of transcription by RNA polymerase I. Predicted to be part of t-UTP complex. Predicted to be active in nucleolus. Is expressed in organism. Orthologous to human UTP15 (UTP15 small subunit processome component). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See CG3071 in Genome Data Viewer
    Location:
    2F2-2F2; 1-0.9 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2262837..2264825)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2156870..2158858)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tempura Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45480 Neighboring gene Grp170 co-chaperone

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables snoRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of transcription by RNA polymerase I IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of transcription by RNA polymerase I ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in rRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of t-UTP complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG3071-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      2262837..2264825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130637.4NP_569993.1  uncharacterized protein Dmel_CG3071 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569993.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O46069, Q9W4Z9
      Related
      FBpp0070382
      Conserved Domains (4) summary
      COG2319
      Location:26283
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:89318
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam09384
      Location:352494
      UTP15_C; UTP15 C terminal
      sd00039
      Location:87121
      7WD40; WD40 repeat [structural motif]