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    Ankyrin repeat family protein with DHHC zinc finger domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 2745525, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
    Primary source
    TAIR:AT2G14255
    Locus tag
    AT2G14255
    See related
    Araport:AT2G14255
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (6036804..6041097)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene proline iminopeptidase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_201724.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 

    General protein information

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    Preferred Names
    Ankyrin repeat family protein with DHHC zinc finger domain-containing protein
    NP_973453.2
    • Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6036804..6041097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201724.3 → NP_973453.2  Ankyrin repeat family protein with DHHC zinc finger domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973453.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A2RVQ6, Q3EC11, Q9ZQ58
      UniProtKB/TrEMBL
      A0A178VPK2, A0A5S9WY99, A0A654EU52
      Conserved Domains (7) summary
      smart00248
      Location:57 → 85
      ANK; ankyrin repeats
      cd00204
      Location:85 → 211
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam01529
      Location:363 → 492
      zf-DHHC; DHHC palmitoyltransferase
      pfam12796
      Location:62 → 188
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:28 → 78
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:110 → 165
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:92 → 155
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3EC11.2

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