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    jph-1 Junctophilin-1 [ Caenorhabditis elegans ]

    Gene ID: 266843, updated on 2-Nov-2024

    Summary

    Official Symbol
    jph-1
    Official Full Name
    Junctophilin-1
    Primary source
    WormBase:WBGene00002179
    Locus tag
    CELE_T22C1.7
    See related
    AllianceGenome:WB:WBGene00002179
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable structural molecule activity. Involved in locomotion and positive regulation of engulfment of apoptotic cell. Predicted to be located in membrane. Predicted to be part of junctional membrane complex. Predicted to be active in endoplasmic reticulum membrane and plasma membrane. Is expressed in body wall musculature; muscle cell; nerve ring; and neurons. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2K; Huntington's disease-like 2; dilated cardiomyopathy 2E; and hypertrophic cardiomyopathy 17. Orthologous to several human genes including JPH3 (junctophilin 3). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See jph-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (7946193..7951593, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene TFIIIC_sub6 domain-containing protein Neighboring gene Transport and Golgi organization protein 1 homolog Neighboring gene ncRNA Neighboring gene ncRNA

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural molecule activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in locomotion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in muscle contraction TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of engulfment of apoptotic cell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of junctional membrane complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of junctional membrane complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    Junctophilin-1
    NP_492193.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7946193..7951593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059792.9NP_492193.2  Junctophilin-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492193.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22667, Q966S4
      Conserved Domains (2) summary
      smart00698
      Location:5874
      MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
      pfam02493
      Location:306328
      MORN; MORN repeat