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    arp8 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543563, updated on 22-Aug-2024

    Summary

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    Official Symbol
    arp8
    Primary source
    PomBase:SPAC664.02c
    Locus tag
    SPOM_SPAC664.02C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See arp8 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003424.3 (1704815..1707303, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene heterochromatin (HP1) family chromodomain protein Swi6 Neighboring gene tRNA-Lys Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNA polymerase II-associated Paf1 complex protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Ino80 complex mediates epigenetic centromere propagation via active removal of histone H3. Choi ES, et al. Nat Commun, 2017 Sep 13. PMID 28904333, Free PMC Article
    2. H2A.Z-dependent regulation of cohesin dynamics on chromosome arms. Tapia-Alveal C, et al. Mol Cell Biol, 2014 Jun. PMID 24687850, Free PMC Article
    3. Fission yeast Iec1-ino80-mediated nucleosome eviction regulates nucleotide and phosphate metabolism. Hogan CJ, et al. Mol Cell Biol, 2010 Feb. PMID 19933844, Free PMC Article
    4. The INO80 Complex Regulates Epigenetic Inheritance of Heterochromatin. Shan CM, et al. Cell Rep, 2020 Dec 29. PMID 33378674, Free PMC Article
    5. Widespread cotranslational formation of protein complexes. Duncan CD, et al. PLoS Genet, 2011 Dec. PMID 22144913, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in CENP-A containing chromatin assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in DNA repair-dependent chromatin remodeling EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in double-strand break repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation-coupled chromatin remodeling EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ino80 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of Ino80 complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Ino80 complex actin-like protein Arp8

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1704815..1707303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018883.3 → NP_593450.2  Ino80 complex actin-like protein Arp8 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593450.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9US07, Q9UU33
      Conserved Domains (1) summary
      COG5277
      Location:91 → 656
      COG5277; Actin-related protein [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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