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    nop52 Nop52 family nucleolar protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541297, updated on 18-Sep-2024

    Summary

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    Official Symbol
    nop52
    Official Full Name
    Nop52 family nucleolar protein
    Primary source
    PomBase:SPBC9B6.07
    Locus tag
    SPOM_SPBC9B6.07
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See nop52 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003423.3 (1824553..1825623)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene U6 snRNP-associated protein Lsm3 Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein uL15m Neighboring gene tRNA-Pro Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA. Zhang K, et al. Science, 2011 Mar 25. PMID 21436456, Free PMC Article
    2. Chromatin localization of nucleophosmin organizes ribosome biogenesis. Ugolini I, et al. Mol Cell, 2022 Dec 1. PMID 36423630, Free PMC Article
    3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in assembly of large subunit precursor of preribosome EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in rRNA processing ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus HDA PubMed 
    is_active_in nucleus HDA PubMed 
    part_of preribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of preribosome, small subunit precursor ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    Nop52 family nucleolar protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1824553..1825623
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021649.3 → NP_595749.1  Nop52 family nucleolar protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595749.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7M6
      Conserved Domains (1) summary
      pfam05997
      Location:5 → 206
      Nop52; Nucleolar protein,Nop52
    Nucleotide Protein
    Heading Accession and Version

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