U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    bmc1 Bin3 family regulator [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540331, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    bmc1
    Official Full Name
    Bin3 family regulator
    Primary source
    PomBase:SPBC2A9.10
    Locus tag
    SPOM_SPBC2A9.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    bin3
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See bmc1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (2964103..2965576)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene SNARE protein Sec22 Neighboring gene ncRNA Neighboring gene phosducin family protein Neighboring gene ncRNA Neighboring gene nuclear export factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene origin recognition complex subunit Orc6

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The fission yeast methyl phosphate capping enzyme Bmc1 guides 2'-O-methylation of the U6 snRNA. Porat J, et al. Nucleic Acids Res, 2023 Sep 8. PMID 37403782, Free PMC Article
    2. The methyl phosphate capping enzyme Bmc1/Bin3 is a stable component of the fission yeast telomerase holoenzyme. Porat J, et al. Nat Commun, 2022 Mar 11. PMID 35277511, Free PMC Article
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables O-methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA 5'-gamma-phosphate methyltransferase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables RNA methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables snRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables snoRNA binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in snRNA modification IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in snRNA processing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in telomere maintenance IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sno(s)RNA-containing ribonucleoprotein complex EXP
    Inferred from Experiment
    more info
    		 PubMed 
    part_of telomerase holoenzyme complex EXP
    Inferred from Experiment
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Bin3 family regulator

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2964103..2965576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022139.3 → NP_596220.1  Bin3 family regulator [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596220.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7L2
      Conserved Domains (2) summary
      pfam06859
      Location:147 → 256
      Bin3; Bicoid-interacting protein 3 (Bin3)
      pfam12847
      Location:36 → 189
      Methyltransf_18; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials