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    F22E5.12 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184840, updated on 18-Sep-2024

    Summary

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    Official Symbol
    F22E5.12
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00017710
    Locus tag
    CELE_F22E5.12
    See related
    AllianceGenome:WB:WBGene00017710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein homooligomerization. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TNFAIP1 (TNF alpha induced protein 1); KCTD10 (potassium channel tetramerization domain containing 10); and KCTD13 (potassium channel tetramerization domain containing 13). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See F22E5.12 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (2645101..2646856, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TransThyretin-Related family domain Neighboring gene BTB domain-containing protein Neighboring gene WGS project CBMG000000000 data, contig CS5907- Neighboring gene BTB domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_494318.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2645101..2646856 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061917.2 → NP_494318.2  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16709
      Conserved Domains (1) summary
      pfam02214
      Location:9 → 96
      BTB_2; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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