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    idpp-11 EB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183776, updated on 18-Sep-2024

    Summary

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    Official Symbol
    idpp-11
    Official Full Name
    EB domain-containing protein
    Primary source
    WormBase:WBGene00016915
    Locus tag
    CELE_C54D2.1
    See related
    AllianceGenome:WB:WBGene00016915
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See idpp-11 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (7842541..7845557)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DUF281 domain-containing protein Neighboring gene Voltage-dependent T-type calcium channel subunit alpha Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Jofré DM, et al. Proc Natl Acad Sci U S A, 2022 Apr 12. PMID 35394881, Free PMC Article
    2. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    EB domain-containing protein
    NP_001360717.1
    • Confirmed by transcript evidence
    NP_001360718.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      7842541..7845557
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373377.1 → NP_001360717.1  EB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V6M3D3
      Conserved Domains (1) summary
      pfam01683
      Location:336 → 383
      EB; EB module

    2. NM_001373378.1 → NP_001360718.1  EB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKE1
      Conserved Domains (1) summary
      pfam01683
      Location:332 → 379
      EB; EB module
    Nucleotide Protein
    Heading Accession and Version

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