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    pqn-62 SAP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180789, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pqn-62
    Official Full Name
    SAP domain-containing protein
    Primary source
    WormBase:WBGene00004145
    Locus tag
    CELE_T03G11.1
    See related
    AllianceGenome:WB:WBGene00004145
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pqn-62 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    18
    Sequence:
    Chromosome: X; NC_003284.9 (5196110..5204274)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene WW domain-binding protein 11 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SAP domain-containing protein
    NP_001300374.1
    • Confirmed by transcript evidence
    NP_001300375.1
    • Partially confirmed by transcript evidence
    NP_001368582.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      5196110..5204274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001313446.4 → NP_001300375.1  SAP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ATD0
      Conserved Domains (2) summary
      pfam02037
      Location:435 → 462
      SAP; SAP domain
      pfam09770
      Location:174 → 322
      PAT1; Topoisomerase II-associated protein PAT1

    2. NM_001380960.1 → NP_001368582.1  SAP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AVN9
      Conserved Domains (2) summary
      pfam02037
      Location:428 → 456
      SAP; SAP domain
      pfam09770
      Location:167 → 315
      PAT1; Topoisomerase II-associated protein PAT1

    3. NM_001313445.3 → NP_001300374.1  SAP domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AYL9
      Conserved Domains (2) summary
      pfam02037
      Location:336 → 363
      SAP; SAP domain
      pfam09770
      Location:75 → 223
      PAT1; Topoisomerase II-associated protein PAT1
    Nucleotide Protein
    Heading Accession and Version

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