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    F49C12.12 DUF1648 domain-containing protein;Ribonuclease kappa [ Caenorhabditis elegans ]

    Gene ID: 177755, updated on 2-Nov-2024

    Summary

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    Official Symbol
    F49C12.12
    Official Full Name
    DUF1648 domain-containing protein;Ribonuclease kappa
    Primary source
    WormBase:WBGene00009881
    Locus tag
    CELE_F49C12.12
    See related
    AllianceGenome:WB:WBGene00009881
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA endonuclease activity. Predicted to be located in membrane. Orthologous to human RNASEK (ribonuclease K). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See F49C12.12 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (9320122..9321089, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene UBA domain-containing protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 6 Neighboring gene Methyltransferase type 11 domain-containing protein Neighboring gene Translation machinery-associated protein 7 homolog Neighboring gene V-type proton ATPase subunit e Neighboring gene DUF19 domain-containing protein Neighboring gene Serine/arginine repetitive matrix protein 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF1648 domain-containing protein;Ribonuclease kappa
    NP_001294041.1
    • Confirmed by transcript evidence
    NP_501635.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9320122..9321089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069234.7 → NP_501635.1  Ribonuclease kappa [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501635.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20589

    2. NM_001307112.3 → NP_001294041.1  DUF1648 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294041.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5LX67
    Nucleotide Protein
    Heading Accession and Version

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