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    C40A11.6 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173572, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C40A11.6
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00016549
    Locus tag
    CELE_C40A11.6
    See related
    AllianceGenome:WB:WBGene00016549
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein homooligomerization. Orthologous to human TNFAIP1 (TNF alpha induced protein 1); KCTD10 (potassium channel tetramerization domain containing 10); and KCTD13 (potassium channel tetramerization domain containing 13). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See C40A11.6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (2144292..2145666, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene G protein-coupled receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB domain-containing protein
    NP_494197.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2144292..2145666 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061796.4 → NP_494197.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZA8
      Conserved Domains (1) summary
      pfam02214
      Location:8 → 98
      BTB_2; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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