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    lncRNA:CR43874 long non-coding RNA:CR43874 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462877, updated on 22-Aug-2024

    Summary

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    Official Symbol
    lncRNA:CR43874provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43874provided by FlyBase
    Primary source
    FLYBASE:FBgn0264466
    Locus tag
    Dmel_CR43874
    See related
    AllianceGenome:FB:FBgn0264466
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43874; Dmel\CR43874
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    Genomic context

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    Location:
    74A2-74A2; 3-45 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17259661..17260449)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17252761..17253550)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43870 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45436

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43874-RA; Dmel\lncRNA:CR43874-RA; CR43874-RA; Dmel\CR43874-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      17259661..17260449
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073944.2 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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