U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC1281784 synaptosomal-associated protein 25 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1281784, updated on 22-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC1281784
    Gene description
    synaptosomal-associated protein 25
    See related
    VectorBase:AGAMI1_007752
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001394
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC1281784 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (4084267..4105276)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4577438 Neighboring gene SAGA associated factor 11kDa Neighboring gene uncharacterized LOC133391077 Neighboring gene trypsin-1 Neighboring gene putative inositol monophosphatase 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
    2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle priming IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    synaptosomal-associated protein 25
    Names
    AGAP001394-PA
    AGAP001394-PB
    synaptosomal-associated protein, 23kDa

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      4084267..4105276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061641213.1 → XP_061497197.1  synaptosomal-associated protein 25 isoform X1

    2. XM_003435769.2 → XP_003435817.1  synaptosomal-associated protein 25 isoform X5

      See identical proteins and their annotated locations for XP_003435817.1

      UniProtKB/TrEMBL
      F5HMS4
      Conserved Domains (3) summary
      cd15885
      Location:152 → 210
      SNARE_SNAP25C; C-terminal SNARE motif of SNAP25
      cd15889
      Location:24 → 88
      SNARE_SNAP25N_23N; N-terminal SNARE motif of SNAP25 and SNAP23
      pfam00835
      Location:99 → 150
      SNAP-25; SNAP-25 family

    3. XM_321742.6 → XP_321742.4  synaptosomal-associated protein 25 isoform X4

      See identical proteins and their annotated locations for XP_321742.4

      UniProtKB/TrEMBL
      Q7PUS1
      Conserved Domains (3) summary
      cd15885
      Location:152 → 210
      SNARE_SNAP25C; C-terminal SNARE motif of SNAP25
      cd15889
      Location:24 → 88
      SNARE_SNAP25N_23N; N-terminal SNARE motif of SNAP25 and SNAP23
      pfam00835
      Location:99 → 150
      SNAP-25; SNAP-25 family

    4. XM_061641215.1 → XP_061497199.1  synaptosomal-associated protein 25 isoform X3

    5. XM_061641214.1 → XP_061497198.1  synaptosomal-associated protein 25 isoform X2

    RNA

    1. XR_009764567.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials