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    LOC1280796 zinc finger HIT domain-containing protein 3 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1280796, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1280796
    Gene description
    zinc finger HIT domain-containing protein 3
    See related
    VectorBase:AGAMI1_009143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP011858
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1280796 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (91565207..91641300)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133393025 Neighboring gene 17-beta-hydroxysteroid dehydrogenase 14 Neighboring gene uncharacterized LOC133392725 Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene transfer RNA proline (anticodon CGG) Neighboring gene beta-glucuronidase Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA serine (anticodon CGA)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in box C/D snoRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in snoRNA localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pre-snoRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger HIT domain-containing protein 3
    Names
    AGAP011858-PA
    putative zinc finger hit domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      91565207..91641300
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_320662.4 → XP_320662.3  zinc finger HIT domain-containing protein 3

      See identical proteins and their annotated locations for XP_320662.3

      UniProtKB/TrEMBL
      Q7PZE1
      Conserved Domains (1) summary
      pfam04438
      Location:1 → 31
      zf-HIT; HIT zinc finger
    Nucleotide Protein Strain
    Heading Accession and Version

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