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    CG43171 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798393, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG43171provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262790
    Locus tag
    Dmel_CG43171
    See related
    AllianceGenome:FB:FBgn0262790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG43171; MIP03715; MIP03715_ORF_1
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    Genomic context

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    See CG43171 in Genome Data Viewer
    Location:
    47A2-47A2; 2-62 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10352456..10353114, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6239961..6240587, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Nidogen Neighboring gene uncharacterized protein Neighboring gene slowpoke 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of functional elements and regulatory circuits by Drosophila modENCODE. modENCODE Consortium, et al. Science, 2010 Dec 24. PMID 21177974, Free PMC Article
    2. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    3. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43171-PA
    CG43171-PB
    CG43171-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      10352456..10353114 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299355.2 → NP_001286284.1  uncharacterized protein Dmel_CG43171, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286284.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E0R7Q0

    2. NM_001259317.2 → NP_001246246.1  uncharacterized protein Dmel_CG43171, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246246.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E0R7Q0

    3. NM_001316412.1 → NP_001303341.1  uncharacterized protein Dmel_CG43171, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      E0R7Q0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E0R7Q0 E0R7Q0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials