U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    lncRNA:CR43417 long non-coding RNA:CR43417 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798319, updated on 11-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    lncRNA:CR43417provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43417provided by FlyBase
    Primary source
    FLYBASE:FBgn0263336
    Locus tag
    Dmel_CR43417
    See related
    AllianceGenome:FB:FBgn0263336
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43417; Dmel\CR43417
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See lncRNA:CR43417 in Genome Data Viewer
    Location:
    53D10-53D11; 2-80 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16817519..16819240, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12705024..12706745, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44379 Neighboring gene long non-coding RNA:CR44380 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identifying new players in structural synaptic plasticity through dArc1 interrogation. Xiao C, et al. iScience, 2023 Nov 17. PMID 37876812, Free PMC Article
    2. Dietary Supplementation with Milk Lipids Leads to Suppression of Developmental and Behavioral Phenotypes of Hyperexcitable Drosophila Mutants. Kasuya J, et al. Neuroscience, 2023 Jun 1. PMID 37004908, Free PMC Article
    3. Genome-Wide Identification of Long Noncoding RNA and Their Potential Interactors in ISWI Mutants. Zhang L, et al. Int J Mol Sci, 2022 Jun 2. PMID 35682924, Free PMC Article
    4. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    • lncRNA:CR43417-RA; Dmel\lncRNA:CR43417-RA; CR43417-RA; Dmel\CR43417-RA
    • lncRNA:CR43417-RB; Dmel\lncRNA:CR43417-RB; CR43417-RB; Dmel\CR43417-RB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16817519..16819240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_048126.1 RNA Sequence

      Status: REVIEWED

    2. NR_048127.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.