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    lncRNA:CR43431 long non-coding RNA:CR43431 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798225, updated on 26-Apr-2024

    Summary

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    Official Symbol
    lncRNA:CR43431provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43431provided by FlyBase
    Primary source
    FLYBASE:FBgn0263379
    Locus tag
    Dmel_CR43431
    See related
    AllianceGenome:FB:FBgn0263379
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43431; Dmel\CR43431
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    Genomic context

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    See lncRNA:CR43431 in Genome Data Viewer
    Location:
    69D1-69D1; 3-38 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (12648907..12653090, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (12642007..12646190, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene caupolican Neighboring gene long non-coding RNA:CR32111 Neighboring gene long non-coding RNA:CR44553 Neighboring gene long non-coding RNA:CR44552

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Homeodomain Iroquois Proteins Control Cell Cycle Progression and Regulate the Size of Developmental Fields. Barrios N, et al. PLoS Genet, 2015 Aug. PMID 26305360, Free PMC Article
    2. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43431-RA; Dmel\lncRNA:CR43431-RA; CR43431-RA; Dmel\CR43431-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      12648907..12653090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_048272.2 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.