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    lncRNA:CR43486 long non-coding RNA:CR43486 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798038, updated on 26-Apr-2024

    Summary

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    Official Symbol
    lncRNA:CR43486provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43486provided by FlyBase
    Primary source
    FLYBASE:FBgn0263497
    Locus tag
    Dmel_CR43486
    See related
    AllianceGenome:FB:FBgn0263497
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43486; Dmel\CR43486; lincRNA.695
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    Genomic context

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    See lncRNA:CR43486 in Genome Data Viewer
    Location:
    83D4-83D4; 3-47.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6126476..6127152, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1952199..1952598, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Odorant-binding protein 83g Neighboring gene Vacuolar H[+] ATPase 14kD subunit 2 Neighboring gene long non-coding RNA:CR43487 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Wen K, et al. Genome Res, 2016 Sep. PMID 27516619, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43486-RA; Dmel\lncRNA:CR43486-RA; CR43486-RA; Dmel\CR43486-RA
    • lncRNA:CR43486-RB; Dmel\lncRNA:CR43486-RB; CR43486-RB; Dmel\CR43486-RB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      6126476..6127152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_133335.1 RNA Sequence

      Status: REVIEWED

    2. NR_048328.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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