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    LOC1273567 large ribosomal subunit protein uL16 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1273567, updated on 14-Jun-2024

    Summary

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    Gene symbol
    LOC1273567
    Gene description
    large ribosomal subunit protein uL16
    Locus tag
    AgaP_AGAP002395
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    RpL10-2; AGAP002395
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    Genomic context

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    See LOC1273567 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (20645248..20646583, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 7 Neighboring gene GDP-fucose transporter nac Neighboring gene RNA polymerase III subunit C Neighboring gene catalytic subunit 3B of the oligosaccharyltransferase complex Neighboring gene L-asparaginase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein uL16
    Names
    60S ribosomal protein L10-2
    AGAP002395-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      20645248..20646583 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_312560.5 → XP_312560.3  large ribosomal subunit protein uL16

      See identical proteins and their annotated locations for XP_312560.3

      UniProtKB/TrEMBL
      F5HJ13, Q7PQZ6
      Conserved Domains (1) summary
      PTZ00173
      Location:1 → 213
      PTZ00173; 60S ribosomal protein L10; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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