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    LOC1271485 protein lava lamp [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271485, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1271485
    Gene description
    protein lava lamp
    See related
    VectorBase:AGAMI1_010713
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP029052
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1271485 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (42163019..42253605, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene mucin-5AC Neighboring gene uncharacterized LOC133391399 Neighboring gene non-specific lethal 1 Neighboring gene protein Fer3 Neighboring gene nucleolin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in type III intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein lava lamp
    Names
    AGAP003753-PA
    AGAP003753-PB
    JAKMIP_CC3 domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      42163019..42253605 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061650664.1 → XP_061506648.1  protein lava lamp isoform X2

    2. XM_061650663.1 → XP_061506647.1  protein lava lamp isoform X1

    RNA

    1. XR_009765449.1 RNA Sequence

    2. XR_009765448.1 RNA Sequence

    3. XR_009765447.1 RNA Sequence

    4. XR_009765453.1 RNA Sequence

    5. XR_009765452.1 RNA Sequence

    6. XR_009765454.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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