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    LOC1270438 heat shock protein beta-1 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1270438, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1270438
    Gene description
    heat shock protein beta-1
    See related
    VectorBase:AGAMI1_013492
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000941
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1270438 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (18569366..18578075, complement)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene Platelet-activating factor acetylhydrolase alpha Neighboring gene integrator complex subunit 6 homolog Neighboring gene mitochondrial coenzyme A diphosphatase NUDT8 Neighboring gene chloride intracellular channel protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat shock protein beta-1
    Names
    AGAP000941-PA
    AGAP000941-PB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      18569366..18578075 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_560153.5 → XP_560153.3  heat shock protein beta-1 isoform X2

      See identical proteins and their annotated locations for XP_560153.3

      UniProtKB/TrEMBL
      Q5TWA3
      Conserved Domains (1) summary
      cd06526
      Location:93 → 169
      metazoan_ACD; Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are ...

    2. XM_003437095.2 → XP_003437143.1  heat shock protein beta-1 isoform X1

      See identical proteins and their annotated locations for XP_003437143.1

      UniProtKB/TrEMBL
      F5HJ02
      Conserved Domains (1) summary
      cd06526
      Location:104 → 180
      metazoan_ACD; Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are ...
    Nucleotide Protein Strain
    Heading Accession and Version

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