U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    atp13a2 ATPase cation transporting 13A2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 116412065, updated on 4-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    atp13a2provided by Xenbase
    Official Full Name
    ATPase cation transporting 13A2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-996840
    See related
    Ensembl:ENSXETG00000048227 AllianceGenome:Xenbase:XB-GENE-996840
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    krppd; park9
    Summary
    Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and ATPase-coupled transmembrane transporter activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See atp13a2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (131872201..131914858, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene microfibril associated protein 2 Neighboring gene uncharacterized LOC116412474 Neighboring gene succinate dehydrogenase complex subunit B, iron sulfur (Ip)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_030683.2 Chromosome 7 Reference UCB_Xtro_10.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables P-type ion transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cation-transporting ATPase 13A2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      131872201..131914858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031905436.1 → XP_031761296.1  cation-transporting ATPase 13A2 isoform X1

      UniProtKB/TrEMBL
      A0A803JLG8, A0A803JSD7
      Related
      ENSXETP00000110914.1, ENSXETT00000124214.1
      Conserved Domains (1) summary
      TIGR01657
      Location:29 → 1098
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

    2. XM_031905437.1 → XP_031761297.1  cation-transporting ATPase 13A2 isoform X2

      UniProtKB/TrEMBL
      A0A803JLG8, A0A803JN09
      Related
      ENSXETP00000117290.1, ENSXETT00000114865.1
      Conserved Domains (1) summary
      TIGR01657
      Location:1 → 1070
      P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.