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    LOC11175958 tripartite motif-containing protein 75 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 11175958, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC11175958
    Gene description
    tripartite motif-containing protein 75
    See related
    VectorBase:AGAMI1_004431
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP013215
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    Genomic context

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    See LOC11175958 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (37025992..37027152)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene alanyl-tRNA editing protein Aarsd1-A Neighboring gene glutaredoxin 3 Neighboring gene probable prefoldin subunit 5 Neighboring gene hydroxysteroid 17-beta dehydrogenase 10 Neighboring gene TBC1 domain family member 5 Neighboring gene acyl-CoA Delta-9 desaturase Neighboring gene uncharacterized LOC11176007 Neighboring gene protein apnoia

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 75
    Names
    AGAP013215-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      37025992..37027152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003436425.2 → XP_003436473.1  tripartite motif-containing protein 75

      See identical proteins and their annotated locations for XP_003436473.1

      UniProtKB/TrEMBL
      F5HK12
      Conserved Domains (2) summary
      COG5574
      Location:7 → 90
      PEX10; RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
      cd16449
      Location:50 → 89
      RING-HC; HC subclass of RING (RING-HC) finger and its variants
    Nucleotide Protein Strain
    Heading Accession and Version

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